NAG Library Function Document

nag_gamma_pdf (g01kfc)

then an algorithm based directly on the gamma distribution's PDF is used. For values outside this range, the function is calculated via the Poisson distribution's PDF as described in Loader (2000) (see Section 9).

4 References

Loader C (2000) Fast and accurate computation of binomial probabilities (not yet published)

5 Arguments

1: x – doubleInput

On entry:

x

, the value at which the PDF is to be evaluated.

2: a – doubleInput

On entry:

α

, the shape argument of the gamma distribution.

Constraint:

a > 0.0

3: b – doubleInput

On entry:

β

, the scale argument of the gamma distribution.

Constraints:

$b > 0.0$ ;
$\frac{x}{b} < \frac{1}{nag_real_safe_small_number ()}$ .

4: fail – NagError *Input/Output

The NAG error argument (see Section 3.6 in the Essential Introduction).

6 Error Indicators and Warnings

NE_INTERNAL_ERROR: An internal error has occurred in this function. Check the function call and any array sizes. If the call is correct then please contact NAG for assistance.
NE_OVERFLOW: Computation abandoned owing to overflow due to extreme parameter values.
NE_REAL: On entry, $a = ⟨value⟩$ .
Constraint: $a > 0.0$ .
On entry, $b = ⟨value⟩$ .
Constraint: $b > 0.0$ .

7 Accuracy

Not applicable.

8 Parallelism and Performance

Not applicable.

9 Further Comments

Due to the lack of a stable link to Loader (2000) paper, we give a brief overview of the method, as applied to the Poisson distribution. The Poisson distribution has a continuous mass function given by,

p (x; λ) = \frac{λ^{x}}{x!} e^{- λ} .

(1)

The usual way of computing this quantity would be to take the logarithm and calculate,

\log (x; λ) = x \log λ - \log (x!) - λ .

For large

x

and

λ

x \log λ

and

\log (x!)

are very large, of the same order of magnitude and when calculated have rounding errors. The subtraction of these two terms can therefore result in a number, many orders of magnitude smaller and hence we lose accuracy due to subtraction errors. For example for

x = 2 \times 10^{6}

and

λ = 2 \times 10^{6}

\log (x!) \approx 2.7 \times 10^{7}

and

\log (p (x; λ)) = - 8.17326744645834

. But calculated with the method shown later we have

\log (p (x; λ)) = - 8.1732674441334492

. The difference between these two results suggests a loss of about 7 significant figures of precision.

Loader introduces an alternative way of expressing (1) based on the saddle point expansion,

\log (p (x; λ)) = \log (p (x; x)) - D (x; λ),

(2)

where

D (x; λ)

, the deviance for the Poisson distribution is given by,

\begin{matrix} D (x; λ) & = & \log (p (x; x)) - \log (p (x; λ)), \\ = & λ D_{0} (\frac{x}{λ}), \end{matrix}

(3)

and

D_{0} (ε) = ε \log ε + 1 - ε .

For

ε

close to

1

D_{0} (ε)

can be evaluated through the series expansion

λ D_{0} (\frac{x}{λ}) = \frac{{(x - λ)}^{2}}{x + λ} + 2 x \sum_{j = 1}^{\infty} \frac{v^{2 j + 1}}{2 j + 1},   where ​ v = \frac{x - λ}{x + λ},

otherwise

D_{0} (ε)

can be evaluated directly. In addition, Loader suggests evaluating

\log (x!)

using the Stirling–De Moivre series,

\log (x!) = \frac{1}{2} \log (2 π x) + x \log (x) - x + δ (x),

(4)

where the error

δ (x)

is given by

δ (x) = \frac{1}{12 x} - \frac{1}{{360 x}^{3}} + \frac{1}{{1260 x}^{5}} + O (x^{- 7}) .

Finally

\log (p (x; λ))

can be evaluated by combining equations (1)–(4) to get,

p (x; λ) = \frac{1}{\sqrt{2 π x}} e^{- δ (x) - λ D_{0} (x / λ)} .

10 Example

This example prints the value of the gamma distribution PDF at six different points x with differing a and b.

NAG Library Function Documentnag_gamma_pdf (g01kfc)

+− Contents

1 Purpose

2 Specification

3 Description

4 References

5 Arguments

6 Error Indicators and Warnings

7 Accuracy

8 Parallelism and Performance

9 Further Comments

10 Example

10.1 Program Text

10.2 Program Data

10.3 Program Results

NAG Library Function Document

nag_gamma_pdf (g01kfc)